Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940304.1_cds_XP_016484583.1_75583
CDS Infomation

[gene=LOC107805107] [db_xref=GeneID:107805107] [protein=transcription factor bHLH90-like isoform X3] [protein_id=XP_016484583.1] [location=join(4969..5060,5288..5473,5587..5665,5779..5859,6065..6619,6698..6922,7047..7223,7624..7689)] [gbkey=CDS]
Sequence

ATGGAAAGAGCATTGGAATGGTTAAGGCCACTTATTGATTCCAACAATTGGGAATATTGT
GTTGTTTGGAAGTTGGGTGATGACCCTTCTAGGTTTATAGAATGGATAGGATGTTGCTGT
GCTGGAGCTAAAGCAGTTGATGTCAATGTGAAGAAAGAAAATGGAGGACAGCTGACATTC
ACTACTCTGTGTAGAGATAGCCAAATTCAGCATCCTATTAGAACAAAGGCTTGTGAGGCT
TTAGCTCATTTTCCTCTTTCTATTTCCCTTTATTCTGGGATTCAGGGAGAGGTAGTAACA
TCAAATGAACCAAAATGGATTAATCATACTGAGGTGTCCAATTCAAATTTGTCTCATTAC
CCTTGGCAGGAATTAAAGGGTACCTTAGTGTTGATCCCAGTTGCTGGTGGACTGGTTGAG
CTCTACAATTCAAAGCTGATATACAAAGATCAAAAGACGATTGATTTCATTATCAATCGG
TTCAAACTTGGTTCAGAAAATGCCAATAGTTCCACAGCAAAGAGAGAAGATCAACCTCTT
GATTCCTTTCCCTTTGAGAAATTGCTGTTTTGTGCTCCTCCCCTGCAATATACAAGTTTT
CCTTCAAGTGCGCCTCTTATTTCTCAAGTATCTGAATCTAGTGCTAATCCTAGCATTCAA
GGATCACCCACTGGTTCCATTCCTTCAAATGAACTTACCTTGTGTCATTCAACTTCTGAC
CATCTGTCGCGAAACATACCTTTAAGCCGATGTAGTGACGGGGATTTTGAGCACACTGAG
CTTCAGTGCAGTGGAAACTTGTCAAGAATGGAAGGTACTGTTTTTCCTTGGAACCAAGAA
AATTATATAATTGCAGGAGATGGCTACACAATGGGTAAGAAAAGACAAAGAGGACCATAT
CAGTCGAAGAATCTTGTCACTGAGAGAAAACGAAGGAACAGAATTAAGGATGGTCTTTTT
GCTCTACGAGCTCTAGTTCCCAACATTTCCAAGATGGACAAAGTTGCAATACTTGGAGAT
GCAATCGACTATATAAATGAATTGCAAGAAAATGTGAAGTTATATCAAGCTGAACTCAAT
GAAATAGCAGCAGAAGTTTCCAACAATGAAAGTTCTGAAGTGGTTCTATCAGACATGAGT
GAAATGTCCAAAGTTACCGGACCAGCAAATGAGAAAACACAAATTTCACTTAATACAACT
AAAAGGACAAGAATGGAGGGGCAAGTGGAAGTGAACCAAATTGGTGCAAGAGAGTTCTTG
TTGAAGGTCTTTGGATCACATAAACCCGGAGGATTTACTCAGTTGTTGGAGGCTATGAAT
TCCTTAGGAATTGAAGTAGTAAATACGAATTTTACCACTTCTGGAGAGGAGATCTTGAGC
ATTTTCATAGCAAGGGCAAATGAGAACAGAGTTGTTGAAGCACAACAGCTGAGATCCTCA
CTTATTGAGCTGACAAGCTGA

Peptide Sequence

PEP ID

XP_016484583.1
PEP Infomation

PREDICTED: transcription factor bHLH90-like isoform X3 [Nicotiana tabacum]
Sequence

MERALEWLRPLIDSNNWEYCVVWKLGDDPSRFIEWIGCCCAGAKAVDVNVKKENGGQLTF
TTLCRDSQIQHPIRTKACEALAHFPLSISLYSGIQGEVVTSNEPKWINHTEVSNSNLSHY
PWQELKGTLVLIPVAGGLVELYNSKLIYKDQKTIDFIINRFKLGSENANSSTAKREDQPL
DSFPFEKLLFCAPPLQYTSFPSSAPLISQVSESSANPSIQGSPTGSIPSNELTLCHSTSD
HLSRNIPLSRCSDGDFEHTELQCSGNLSRMEGTVFPWNQENYIIAGDGYTMGKKRQRGPY
QSKNLVTERKRRNRIKDGLFALRALVPNISKMDKVAILGDAIDYINELQENVKLYQAELN
EIAAEVSNNESSEVVLSDMSEMSKVTGPANEKTQISLNTTKRTRMEGQVEVNQIGAREFL
LKVFGSHKPGGFTQLLEAMNSLGIEVVNTNFTTSGEEILSIFIARANENRVVEAQQLRSS
LIELTS

Transcript Sequence

Gene sequence data has not been registered.